Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015899735.1_cds_XP_016449759.1_44275
CDS Infomation

[gene=LOC107774664] [db_xref=GeneID:107774664] [protein=ATPase 9, plasma membrane-type-like] [protein_id=XP_016449759.1] [location=join(69957..70010,70493..70612,70708..70758,71125..71262,71726..72040,72132..72458,72545..72664,72783..72905,72987..73091,73187..73496,73579..74093,74302..74475,74583..74765,75064..75261)] [gbkey=CDS]
Sequence

ATGACGTCCAATTTATCCTTATTAGAAGATATTAGAAATGAGCAAGTTGATCTTGAAAAC
ATTCCGGTGGAAGAAGTTTTCCAGTGCCTGAAATGTAACAGAGAGGGTTTGACAAATGAA
GAGGGCCAAAATAGACTTCAAATTTTTGGCCATAACAAACTTGAAGAGAAAAAGGAAAAT
AAGGTCCTTAAATTCTTGGGGTTCATGTGGAATCCTCTCTCATGGGGGAAGCCACCGGAT
TGGCCTGACTTTGTAGGTATTGTGGTCTTGCTTATTATCAACTCTACTATCAGTTTCATT
GAAGAAAACAATGCTGGAAATGCTGCAGCTGCCCTTATGGCTAATCTTGCTCCCAAAACT
AAGATTTTGAGAGATGGAAAATGGTCTGAGGAGGAAGCTTCAATCTTGGTTCCAGGTGAT
ATGATTAGTGTTAAATTGGGAGATATTATCCCAGCCGATGCTCGTCTTCTCGAGGGTGAT
CCCCTTAAGATTGATCAGGCTGCACTCACTGGTGAGTCCTTACCAGTCACAAAACAACCT
GGTGATCAAGTTTTTTCTGGTTCCACTGTCAAGCAAGGCGAAATCGAGGCAGTTGTTATT
GCTACTGGTGTTCATACCTTCTTTGGAAAGGCTGCACATCTTGTTGATAGCACAAACCAA
GTTGGTCATTTCCAAAAGGTGTTGACTTCTATTGGGAACTTCTGTATCTGCTCTATAGTT
GTGGGAATAGTGATTGAGATTTTGGTGATGTGGCCGATTCAAAAGCGCAAATATAGAGAT
GGAATTGACAATTTGTTGGTGTTGCTTATTGGAGGTATTCCAATTGCCATGCCAACAGTC
TTGTCTGTTACCATGGCTATTGGATCTCATAGGCTTTCCCAACAAGGTGCCATCACCAAG
CGGATGACTGCTATCGAGGAAATGGCTGGTATGGATGTCCTCTGCAGTGACAAGACCGGT
ACACTCACCTTAAACAAGCTTACTGTCGACAAAAACTTGATTGAGGTATTCCCTAAGAAT
GCAGACAAGGATACGGTTATGTTACTTGCTGCTAGAGCTTCCAGGGTTGAAAACCAGGAT
GCCATTGATGCTTGTATTGTTAATATGTTGAATAATCCCAAAGAGGCAAGAGAAGGCATC
CAAGAGGTTCATTTCTTCCCTTTCAATCCAGTCGATAAGCGCACTGCAATCACATATATT
GATGACAGTGGAAACTGGCACAGGGCTAGCAAAGGCGCTCCTGAGCAAATTATTGAACTC
TGTGATCTCAAGGGAGATGTTTTAAGGAAAGCTCATGAAATCATCGACAACTTTGCCAAC
CGCGGTCTTCGTTCTTTGGGCGTTGCAAGACAGACTGTGCCAGAAAAAGACAAGGACAGT
GCTGGTTCACCTTGGGAATTTGTCGGGCTTTTACCTCTCTTTGATCCACCAAGGCATGAC
AGTGCAGAGACAATTCGCAAAGCTCTCGAGCTTGGTGTTAATGTTAAGATGATCACAGGT
GACCAGCTTGCTATTGGTAAGGAAACTGGCCGTAGGCTTGGTATGGGAACCAACATGTAT
CCGTCTTCAGCTCTTCTCGGGGACCATAAGGATGAGTCGATTGCTTCAATTCCTGTTGAG
GAGCTTATTGAGCAGGCTGATGGCTTTGCAGGAGTCTTCCCAGAACACAAATATGAGATT
GTGAAGAAGCTGCAAGAAAGAAAGCACATCTGTGGTATGACTGGAGATGGTGTCAATGAT
GCACCAGCATTGAAGAAAGCAGACATTGGTATTGCAGTTGACGATGCAACAGACGCTGCC
AGGAGCGCATCTGATATCGTTTTGACTGAACCAGGTCTTGGTGTCATTGTGAGTGCTGTG
TTGACAAGTAGAGCCATCTTCCAGAGAATGAAGAACTACACTATCTATGCAGTTTCAATC
ACAATCCGTGTCGTGATGGGATTCATGCTCATTGCCCTCATTTGGGAATTCGACTTCCCT
CCTTTCATGGTCCTCATCATTGCCATCCTAAACGACGGAACTATCATGACCATCTCTAAG
GACAGGGTGAAGCCATCCCCTCTGCCCGACTCGTGGAAGCTCAACGAAATCTTTGCCACT
GGAATCGTCCTCGGAACCTATCAAGCTATTATGACTGTGGTGTTCTTCTATCTTGCAGCT
GACACTGACTTCTTTACAGAGAAATTCAACGTTAAATCAATCAGGGATAATCCCTACGAG
CTTACAGCTGCTGTATACCTTCAAGTGAGCATCATCAGCCAAGCTCTTATCTTTGTGACA
AGATCAAGAAGCTGGTCATTTTTGGAACGCCCGGGTTTCTTGCTTGTCACTGCTTTCCTC
TTAGCCCAATTTGTGGCTACATTAATCGCTGTCTACGCCAACTGGAAGTTTGCTAGGATC
CATGGAATTGGTTGGGGATGGGCAGGAATCATCTGGATCTACACAATTATCACCTATATC
CCTCTTGATATTCTCAAATTCATCAGTCGTTACACGTTGAGTGGTGAGGCCTGGAATTCA
ATGATCCAAAATAAGACTGCTTTCACAACCAAGAAGGATTATGGAAAAGGTGAGAGGGAA
GCACAATGGGCTGTGGCGCAACGAACACTACACGGTCTCCAGACTGCTGAAAGCAATGGC
CTATTCCATGACAAGAACTACAGAGAATTGAATGAGATTGCTGAACAGGCTAAACGTCGC
GCTGAAGTTGCAAAATATACACATGAGCCATGA

Peptide Sequence

PEP ID

XP_016449759.1
PEP Infomation

PREDICTED: ATPase 9, plasma membrane-type-like [Nicotiana tabacum]
Sequence

MTSNLSLLEDIRNEQVDLENIPVEEVFQCLKCNREGLTNEEGQNRLQIFGHNKLEEKKEN
KVLKFLGFMWNPLSWGKPPDWPDFVGIVVLLIINSTISFIEENNAGNAAAALMANLAPKT
KILRDGKWSEEEASILVPGDMISVKLGDIIPADARLLEGDPLKIDQAALTGESLPVTKQP
GDQVFSGSTVKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTSIGNFCICSIV
VGIVIEILVMWPIQKRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITK
RMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFPKNADKDTVMLLAARASRVENQD
AIDACIVNMLNNPKEAREGIQEVHFFPFNPVDKRTAITYIDDSGNWHRASKGAPEQIIEL
CDLKGDVLRKAHEIIDNFANRGLRSLGVARQTVPEKDKDSAGSPWEFVGLLPLFDPPRHD
SAETIRKALELGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGDHKDESIASIPVE
ELIEQADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVDDATDAA
RSASDIVLTEPGLGVIVSAVLTSRAIFQRMKNYTIYAVSITIRVVMGFMLIALIWEFDFP
PFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLNEIFATGIVLGTYQAIMTVVFFYLAA
DTDFFTEKFNVKSIRDNPYELTAAVYLQVSIISQALIFVTRSRSWSFLERPGFLLVTAFL
LAQFVATLIAVYANWKFARIHGIGWGWAGIIWIYTIITYIPLDILKFISRYTLSGEAWNS
MIQNKTAFTTKKDYGKGEREAQWAVAQRTLHGLQTAESNGLFHDKNYRELNEIAEQAKRR
AEVAKYTHEP

Transcript Sequence

Gene sequence data has not been registered.